J. H. Grose, T. L. Smith, H. Sabic, J. Rutter (2007) Yeast PAS kinase coordinates glucose flux in response to metabolic and cell integrity signaling. EMBO J. 26: 4824. 

H.X. Hao, C.M. Cardon, W. Swiatek, R. C. Cooksey, T. L. Smith, J. Wilde, S. Boudina, E. D. Abel, D. A. McClain, J. Rutter (2007) PAS kinase is required for normal cellular energy balance. Proc. Natl. Acad. Sci, 104:15466.

T. L. Smith, J. Rutter (2007) Regulation of glucose partitioning by PAS kinase and Ugp1 phosphorylation. Molecular Cell, 26:491.

C. Mehlgarten, J. Rutter, R. Schaffrath (2007) Dosage Suppression of the Kluyveromyces lactis zymocin by Saccharomyces cerevisiae ISR1 and UGP1. FEMS Yeast Res., Mar. 16 epub.

R. An, G. daSilva Xavier, H.X. Hao, F. Semplici, J. Rutter, G.A. Rutter (2006) Regulation of PAS kinase of PDX-1 nuclear import in pancreatic beta-cells. Biochem. Soc. Trans., 34: 791.

J. E. Lindsley, J. Rutter (2006) Whence Cometh the Allosterome? Proc. Natl. Acad. Sci, 103:10533.

W. A. Wilson, A. V. Skurat, B. Probst, A. de Paoli-Roach, P. J. Roach, J. Rutter (2005) Control of mammalian glycogen synthase by PAS kinase. Proc. Natl. Acad. Sci., 102:16596.

J. E. Lindsley, J. Rutter (2004) Nutrient sensing and metabolic decisions. Comparative Biochemistry and Physiology, 139(4):543.

G.A. daSilvaXavier, J. Rutter, G. A. Rutter (2004) Involvement of PAS kinase in the stimulation of preproinsulin and pancreatic duodenum homeobox-1 gene expression by glucose. Proc. Natl. Acad. Sci. USA, 101:8319.

E. M. Dioum, J. Rutter, J. R. Tuckerman, G. Gonzalez, M. A. Gilles-Gonzalez, S. L. McKnight (2002) NPAS2: A gas responsive transcription factor. Science, 298:2385.

J. Rutter (2002) PAS domains and metabolic status signaling. Science, 298:1567.

J. Rutter, B. Probst, S.L. McKnight (2002) Coordinate regulation of sugar flux and translation by PAS kinase. Cell, 111:17.

C.A. Amezcua, S. Harper, J. Rutter, K.H. Gardner (2002) Structure and interactions of PAS-kinase N-terminal PAS domain: Model for intramolecular kinase regulation. Structure, 10:1349.

J. Rutter, M. Reick, S.L. McKnight (2002) Metabolism and the Control of Circadian Rhythms. Annual Review of Biochemistry, 71:307.

J. Rutter, C. Michnoff , S. Harper, K.H. Gardner, S.L. McKnight (2001) PAS-kinase: an evolutionarily conserved PAS-domain regulated serine/threonine kinase. Proc. Natl. Acad. Sci. USA, 98: 8991.

J. Rutter, M. Reick, L.C. Wu, S.L. McKnight (2001) Regulation of Clock and NPAS2 DNA Binding Activities by the Redox State of Nicotinamide Adenine Dinucleotides. Science, 293: 510.

J.A. Garcia, D. Zhang, S.J. Estill, C. Michnoff, J. Rutter, M. Reick, K. Scott, R. Diaz-Arrastia, S.L. McKnight (2000) Impaired Cued and Contextual Memory of NPAS2-Deficient Mice. Science 288: 2226.

S.E. Hamilton, A.E. Pitts, R.R. Katipally, X. Jia, J. Rutter, B.A. Davies, J.W. Shay, W.E. Wright, D.R. Corey (1997) Identification of Determinants for Inhibitor Binding within the RNA Active Site of Human Telomerase Using PNA Scanning.  Biochemistry 36:11837.